txid10090[Organism:exp] AND (complex_dna[filt]) AND (structure_cdd_sup - Structure - NCBI

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Select item 2434481.

Molecular Structure Image for 4GZN

Mouse ZFP57 zinc fingers in complex with methylated DNA[TRANSCRIPTION/DNA]

Taxonomy:: Mus musculus, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 6
modified:: 2024-03-06

MMDB ID:: 243448
PDB ID:: 4GZN

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2431582.

Molecular Structure Image for 2RAM

A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER[TRANSCRIPTION/DNA]

Taxonomy:: Mus musculus, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2024-02-27

MMDB ID:: 243158
PDB ID:: 2RAM

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2424783.

Molecular Structure Image for 1AWC

MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA[TRANSCRIPTION/DNA]

Taxonomy:: Mus musculus, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2024-02-07

MMDB ID:: 242478
PDB ID:: 1AWC

View in iCn3D PubMed Proteins Conserved Domains

Select item 2407704.

Molecular Structure Image for 2IRF

CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX[GENE REGULATION/DNA]

Taxonomy:: Mus musculus, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2024-01-01

MMDB ID:: 240770
PDB ID:: 2IRF

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2363145.

Molecular Structure Image for 5EXH

Crystal structure of mTET3-CXXC domain in complex with 5-carboxylcytosine DNA at 1.3 Angstroms resolution[OXIDOREDUCTASE/DNA]

Taxonomy:: synthetic construct, Mus musculus

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2023-10-03

MMDB ID:: 236314
PDB ID:: 5EXH

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2343996.

Molecular Structure Image for 1KEG

Antibody 64M-2 Fab complexed with dTT(6-4)TT[IMMUNE SYSTEM/DNA]

Taxonomy:: synthetic construct, Mus musculus

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2023-08-21

MMDB ID:: 234399
PDB ID:: 1KEG

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2321267.

Molecular Structure Image for 8DK5

Structure of 187bp LIN28b nucleosome with site 0 mutation[TRANSCRIPTION/DNA]

Taxonomy:: Homo sapiens, Mus musculus

Proteins:: 10
Nucleic acids:: (DNA)
modified:: 2023-06-29

MMDB ID:: 232126
PDB ID:: 8DK5

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 2320528.

Molecular Structure Image for 7U0J

Structure of 162bp LIN28b nucleosome[TRANSCRIPTION/DNA]

Taxonomy:: Homo sapiens, Mus musculus

Proteins:: 10
Nucleic acids:: (DNA)
modified:: 2023-06-29

MMDB ID:: 232052
PDB ID:: 7U0J

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 2320519.

Molecular Structure Image for 7U0I

Structure of LIN28b nucleosome bound 2 OCT4[TRANSCRIPTION/DNA]

Taxonomy:: Homo sapiens, synthetic construct, Mus musculus

Proteins:: 12
Nucleic acids:: (DNA)
modified:: 2023-06-29

MMDB ID:: 232051
PDB ID:: 7U0I

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23205010.

Molecular Structure Image for 7U0G

structure of LIN28b nucleosome bound 3 OCT4[TRANSCRIPTION/DNA]

Taxonomy:: Homo sapiens, synthetic construct, Mus musculus

Proteins:: 13
Nucleic acids:: (DNA)
modified:: 2023-06-29

MMDB ID:: 232050
PDB ID:: 7U0G

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23065611.

Molecular Structure Image for 8OSL

Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 2, additional 3D classification and flexible refinement)[GENE REGULATION]

Taxonomy:: Homo sapiens, Mus musculus

Proteins:: 12
Nucleic acids:: (DNA)
modified:: 2023-07-27

MMDB ID:: 230656
PDB ID:: 8OSL

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23065512.

Molecular Structure Image for 8OSK

Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (composite map)[GENE REGULATION]

Taxonomy:: Homo sapiens, synthetic construct, Mus musculus

Proteins:: 10
Nucleic acids:: (DNA)
modified:: 2023-07-27

MMDB ID:: 230655
PDB ID:: 8OSK

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23065413.

Molecular Structure Image for 8OSJ

Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1)[GENE REGULATION]

Taxonomy:: Homo sapiens, synthetic construct, Mus musculus

Proteins:: 10
Nucleic acids:: (DNA)
modified:: 2023-07-27

MMDB ID:: 230654
PDB ID:: 8OSJ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 21943914.

Molecular Structure Image for 7RTI

X-ray structure of RBPJ-L3MBTL3(dT62)-DNA complex[DNA BINDING PROTEIN/DNA]

Taxonomy:: synthetic construct, Mus musculus, Homo sapiens

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2023-10-30

MMDB ID:: 219439
PDB ID:: 7RTI

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 21943815.

Molecular Structure Image for 7RTE

X-ray structure of wild type RBPJ-L3MBTL3-DNA complex[DNA BINDING PROTEIN/DNA]

Taxonomy:: synthetic construct, Mus musculus, Homo sapiens

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 5
modified:: 2023-10-30

MMDB ID:: 219438
PDB ID:: 7RTE

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 21621116.

Molecular Structure Image for 7OOT

X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to an interferon-stimulated response element[DNA BINDING PROTEIN]

Taxonomy:: Homo sapiens, Mus musculus

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-05

MMDB ID:: 216211
PDB ID:: 7OOT

View in iCn3D Similar Structures Proteins Conserved Domains PubChem Compound

Select item 20879117.

Molecular Structure Image for 2ZKD

Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA[LIGASE]

Taxonomy:: Mus musculus, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2023-11-06

MMDB ID:: 208791
PDB ID:: 2ZKD

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 20762718.

Molecular Structure Image for 7OPC

Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4)[TRANSCRIPTION]

Taxonomy:: Sus scrofa, Homo sapiens, Mus musculus

Proteins:: 25
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2021-11-02

MMDB ID:: 207627
PDB ID:: 7OPC

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 20703419.

Molecular Structure Image for 7M1X

Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z[DNA BINDING PROTEIN/DNA]

Taxonomy:: unidentified, Xenopus laevis, Mus musculus

Proteins:: 8
Nucleic acids:: (DNA)
modified:: 2021-12-30

MMDB ID:: 207034
PDB ID:: 7M1X

View in iCn3D PubMed Proteins Conserved Domains

Select item 20344420.

Molecular Structure Image for 7EF9

Crystal structure of mouse MUTYH in complex with DNA containing AP site analogue:8-oxoG (Form II)[DNA BINDING PROTEIN/DNA]

Taxonomy:: Mus musculus, Homo sapiens

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 9
modified:: 2021-07-26

MMDB ID:: 203444
PDB ID:: 7EF9

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

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